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Methods |
-toxin derivative as a probe to examine intracellular cholesterol-rich domains in normal and Niemann-Pick type C1 cells


* Department of Biochemistry, Dartmouth Medical School, Hanover, NH 03755
Departments of Physiology and Biochemistry, Dartmouth Medical School, Hanover, NH 03755
Department of Neurobiology, Tottori University Faculty of Medicine, Yonago 683-8503, Japan
** Biomembrane Research Group, Tokyo Metropolitan Institute of Gerontology, 35-2 Sakae-cho, Itabashi-ku, Tokyo 173-0015, Japan
Published, JLR Papers in Press, February 1, 2003. DOI 10.1194/jlr.D200036-JLR200
1 To whom correspondence should be addressed. e-mail: ta.yuan.chang{at}dartmouth.edu
| ABSTRACT |
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is a proteolytically nicked and biotinylated derivative of a cholesterol binding protein perfringolysin O (
-toxin), and has been used to detect cholesterol-rich domains at the plasma membrane (PM). Here we show that by modifying the cell fixation condition, BC
can also be used to detect cholesterol-rich domains intracellularly. When cells were processed for PM cholesterol staining, the difference in BC
signals between the CT43 (CT) cell, a mutant Chinese hamster ovary cell line lacking the Niemann-Pick type C1 (NPC1) protein, and its parental cell 25RA (RA) was minimal. However, when cells were fixed with 4% paraformaldehyde, they became permeable to BC
. Under this condition, BC
mainly stained cholesterol-rich domains inside the cells, with the signal being much stronger in CT cells than in RA cells. The sensitivity of BC
staining was superior to that of filipin staining. The staining of cholesterol-rich domain(s) inside RA cells was sensitive to ß-cyclodextrin treatment, while most of the staining inside CT cells was relatively resistant to cyclodextrin treatment. Clear differences in intracellular BC
staining were also seen between the normal and mutant NPC1 fibroblasts of human or mouse origin.
Thus, BC
is a powerful tool for visually monitoring cholesterol-rich domains inside normal and NPC cells.
Abbreviations: CD, ß-cyclodextrin; CHO, Chinese hamster ovary; ER, endoplasmic reticulum; GFP, green fluorescent protein; hpCD, 2-hydroxypropyl-ß-cyclodextrin; LDLR, low density lipoprotein receptor; NPC1, Niemann-Pick type C1; PFA, paraformaldehyde; PM, plasma membrane
Supplementary key words BC
perfringolysin O toxin cholesterol metabolism cholesterol stain intracellular cholesterol trafficking cholesterol mutants lipid rafts
| INTRODUCTION |
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For studying intracellular cholesterol transport, the biochemical approach is often problematic, partly because of the difficulty in isolating distinct subcellular organelles in their pure state. In recent years, the microscopic approach has provided invaluable information. One of the most frequently used methods for specifically viewing cholesterol-rich domains in intact cells is to label cholesterol by filipin, a naturally fluorescent polyene antibiotic that has a high affinity toward cholesterol (19). Several problems associated with the use of filipin for highlighting cholesterol in various tissues and cells have been noted in the literature (2024), and are summarized as follows: i) the absorption spectrum of filipin is within the UV range (most of the confocal microscopes commercially available are not equipped with the laser beam that excites in the UV range); ii) the fluorescence signal of filipin bleaches in a short time; iii) in unfixed or fixed cells, filipin deforms the cellular membrane by forming complexes with cholesterol, and causes perturbation of membrane lipid organization; and iv) filipin has been reported to give false-negative results. Two fluorescent analogs of cholesterol, NBD cholesterol, and dehydroergosterol (DHE) have been used by various investigators to track the fate of unesterified sterol in the cell (25, 26). NBD cholesterol exhibits a strong initial fluorescence signal at desirable wavelengths, but bleaches quickly under light exposure. Moreover, NBD cholesterol may not faithfully mimic the behavior of cholesterol inside the cells (25). DHE was reported to behave in a manner similar to cholesterol in many ways (26), but its fluorescence intensity is weak (it absorbs and emits in the UV region, therefore special equipment is required in order to visualize it by fluorescence microscopy). For these reasons, there is a need to develop a reliable and versatile cholesterol-specific probe for microscopic studies.
Recently, a novel probe (BC
) was developed as an effective tool for detecting cholesterol-rich domains (27, 28). The probe is derived from a pore-forming cytolysin produced by the pathogenic bacterium Clostridium perfringens (28). This thiol-activated cytolysin, called perfringolysin O (
-toxin), specifically binds to free (unesterified) cholesterol (2932) and forms oligomeric pores in the membranes (33). The probe BC
was prepared by a two-step procedure. First,
-toxin is proteolytically digested with subtilisin Carlsberg. This step generates a complex of 38 and 15 kDa fragments called C
s (34). Next, the complex C
is biotinylated and purified, resulting in what is called BC
(28). The biotinylation allows C
to be identified through binding to avidin. When used in fluorescence microscopy, the labeling efficiency of BC
depends on the qualities of fluorescent avidin or streptavidin. Various kinds of avidin/streptavidin products with different fluophores, having stable fluorescent properties, are available, making this reagent suitable for double staining purposes. BC
binds to cholesterol in synthetic liposomes and in intact cells with identical affinity to that of the wild-type (WT)
-toxin, but because it does not oligomerize, it bears no hemolytic activity (28, 30, 31). Recently, it was demonstrated that BC
binds to cholesterol-rich microdomains in the PM of intact cells with or without fixation (27, 35, 36).
BC
is relatively high in molecular weight (
57 kDa) and has not been considered to be an effective agent for staining cholesterol inside the cells. In the current work, we show that increasing the concentration of paraformaldehyde (PFA) from 1% to 4% during the cell fixation step allows the entry of BC
to stain cholesterol-rich domains inside mammalian cells. The signal elicited with BC
staining is superior to that of filipin staining. This methodology was proven to be useful in studying cholesterol distribution in the NPC1-dependent manner.
| MATERIALS AND METHODS |
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Preparation of BC
BC
was prepared as previously described (27). Briefly,
-toxin was overexpressed in Escherichia coli strains, and purified by a series of chromatographies (38). It was digested with subtilisin Carlsberg to produce a nicked
-toxin (C
) (34). BC
was then obtained by biotinylating C
as described (28).
Cell lines
RA is a CHO cell line resistant to the cytotoxicity of 25-hydroxycholesterol (12) and contains a gain-of-function mutation in the sterol regulatory element binding protein-1 cleavage-activating protein (SCAP) (13). The CT mutant cell line is isolated as one of the cholesterol-trafficking mutants from mutagenized RA cells (9). It contains the same gain-of-function mutation in SCAP. In addition, it contains a premature translational termination mutation near the 3' end of the NPC1 coding sequence, producing a nonfunctional, truncated NPC1 protein (15). The human fibroblast cell line derived from an NPC patient (93. 22) was the generous gift of Dr. Peter Pentchev.
Isolation of mouse embryonic fibroblasts (MEFs) was performed as described (39). Briefly, at embryonic day 17, mouse embryos were taken out of the uteri of pregnant females from confirmed npc1 heterozygous breeding pairs by caesarean section. For each embryo, the tail and a portion of a limb were removed and prepared for DNA extraction and genotyping according to the procedure described (40). After dissection and incubation in 0.05% trypsin solution, the softened tissue was disrupted by repeated pipetting. Cell debris was separated and the supernatant plated in T25 cm2 flasks. Fibroblasts at early passages (fourth to tenth) were used in the current work. All experimental protocols were approved by the Institutional Animal Care and Research Advisory Committee at Dartmouth Medical School and conducted in accordance with the US Public Health Service guide for the care and use of laboratory animals.
Cell culture
CHO cells were maintained in medium A [Ham's F-12, plus 10% fetal bovine serum (FBS) and 10 µg/ml gentamycin] as monolayers at 37°C with 5% CO2. Medium D refers to Ham's F-12 with 5% delipidated FBS (41), plus 35 µM oleic acid and 10 µg/ml gentamycin. When medium D was used at lower temperatures (below 18°C), sodium bicarbonate was depleted from Ham's F-12 and cells were placed in the incubator without CO2. Human fibroblasts and MEFs were grown in the same conditions as the CHO cells, except that Dulbecco's modified Eagle's medium and Pen-Strep (100 U/ml) were used.
Construction and transfection of green fluorescent protein-tagged NPC1
A PCR fragment was generated using green fluorescent protein (GFP) cDNA as the template and a 5' primer whose sequence corresponds to the C-terminal sequence of the mouse NPC1 from the unique Eco47III restriction site to the end of the reading frame (except the stop codon) followed by the sequence corresponding to six alanines (the spacer), which is in turn followed by a sequence corresponding to the N-terminal sequence of GFP (5'-TATATAAGCGCTACAGAGGGACAGAGAGAGAACGGCTCCTCAATTTTGCAGCAGCAGCAGCAGCAATGGTGAG-CAAGGGCGAGGA-3'). The 3' primer consists of sequences corresponding to the C-terminal sequence of GFP and to HindIII and XhoII restriction sites (5'-CGTCTGAAGCTTAGATCTTTACTTGTACAGCTCGTCCA-3'). The resulting PCR product was digested with HindIII and Eco47III and ligated into an NPC1-containing Bluescript plasmid that had been digested with Eco47III and HindIII and gel purified. The resulting cDNA encoding the NPC1-(ala)6-GFP fusion protein was sequenced on both strands to confirm that it was correct. The GFP-tagged NPC1 protein (NPC1-GFP) was removed from the plasmid with SpeI and HindIII and subcloned into the pREX-IRES vector (42). CT cells were transfected with the NPC1-GFP cDNA using FuGENE 6 according to manufacturer's instructions. Transfected cells were imaged within 23 days of transfection.
Fluorescence microscopy
Cells were grown on glass coverslips in 6-well plates and processed for fluorescence studies. In some experiments, to minimize the possible effect of residual serum adhering to the coverslips, we incubated the cells in a serum-free medium for 2 h before the experiments and noticed no difference in results obtained with or without the preincubation step. For BC
staining of fixed cells, the cells were washed three times and fixed with 4% or 1% PFA in PBS for 10 min or longer at room temperature. After extensive washes with PBS, the cells were preincubated in PBS containing 1% BSA, then 10 µg/ml BC
in 1% BSA-PBS was added and incubated with the cells for 30 min at room temperature. After washing three times, the cells were incubated with either Oregon Green 488- or with Texas Red X-conjugated streptavidin (1 µg/ml) in PBS with 1% BSA at room temperature. After three washes, the coverslips were mounted with a drop of ProLong Anti-Fade media onto the glass plates for image processing. In the case of filipin staining, the protocol was essentially the same except that cells were preincubated with 1.5 mg/ml glycine in PBS for 30 min, then incubated with filipin (125 µg/ml) in PBS for 1 h at room temperature before image processing. For live-cell staining, cells were chilled and kept on ice, washed three times, preincubated in ice-cold phenol red-free Hank's balanced salt solution (HBSS) containing 1% BSA, then incubated with 10 µg/ml BC
in the same solution for 30 min at 4°C. After washing three times with HBSS, the cells were incubated with fluorescent streptavidin in HBSS with 1% BSA at 4°C, and processed for image analysis. Samples were viewed and photographed using a Zeiss Axiophot microscope with a 63x objective equipped with CCD camera DEI-750 from Optronics Engineering (Goleta, CA). DAPI filter, FITC filter, and Texas Red filter were used to visualize filipin, GFP-Oregon Green 488, and Texas Red X, respectively. Using the MetaView 4.5 software from Universal Imaging Corp. (Downingtown, PA), we processed the images. To establish the validity of the localization studies, the BC
-treated samples were labeled with Alexa 568-conjugated streptavidin and viewed with a Bio-Rad (Hercules, CA) MRC-1024 Krypton-Argon laser confocal microscope with 0.2 µm per optical section. The images were constructed by LaserSharp software, and further processed by Adobe Photoshop 5.02.
Flow cytometry
Cells were processed for BC
staining with Oregon Green 488-streptavidin essentially as described above except that the cells were grown without coverslips in 6-well dishes. After the staining, the cells were scraped by rubber policemen into microtubes, pelleted with a brief centrifugation, and resuspended in 1 ml of 1% BSA in either HBSS (for live-cell staining) or PBS (for fixed-cell staining). The cells were analyzed at excitation wavelength of 488 nm and emission wavelength of 515530 nm using FACScan cytometer with CellQuest software (Becton Dickinson, San Jose, CA). Sorted for each sample were 104 cells.
| RESULTS AND DISCUSSION |
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for labeling cholesterol-rich microdomains at the PM of intact cells (27, 43). We used the RA cells and CT cells unfixed or fixed with low concentrations of PFA (1%), incubated them with BC
followed by secondary staining using a fluorescent streptavidin, then viewed cells under a fluorescent microscope with confocal and differential interference contract (DIC) imaging capabilities. To demonstrate localization of the fluorescent signals in the cells, the pictures with the DIC images were superimposed onto the pictures with the BC
staining images.
As expected, treating unfixed or 1% PFA-fixed cells with BC
resulted in strong staining mainly in the vicinity of the cell surface (Fig. 1A
; 1st and 2nd rows). In addition, some intracellular staining signal(s) could also be observed, particularly in CT cells fixed with 1% PFA. Unexpectedly, when RA cells and CT cells were fixed with 4% PFA at room temperature for more than 10 min, we found that the intensity of cell surface staining was significantly reduced. The staining signals now mainly resided inside the cells, with higher intensities observed in CT cells than in RA cells (Fig. 1A; 3rd rows). It is known that NPC1 mutants accumulate a large amount of intracellular cholesterol. This result is thus consistent with the interpretation that under this condition, BC
mainly stains intracellular cholesterol. Control experiments showed that no fluorescence signal was detectable in cells incubated with fluorescent streptavidin alone without BC
(data not shown). We believe that the results seen in 4% PFA fixed cells were mainly due to increased permeability toward BC
, allowing it to be accessible to cholesterol-rich domains in the cell interior. A similar observation was made by Hao and colleagues, who showed that, when treated with an intermediate concentration of PFA (2%), a significant percentage of the CHO cells became permeabilized to macromolecules, as judged by intracellular phalloidin staining (44). The reduced cell surface staining by BC
in cells treated with 4% PFA might be the consequence of deformation/reorganization of the PM, which in turn inhibited the binding between BC
and cholesterol at the PM. [It is possible that the loss of cell surface BC
staining signal after 4% PFA fixation may be due to redistribution of cholesterol from the PM to the internal membranes; however, this interpretation would not be compatible with the earlier biochemical data (using subcellular fractionation analysis in vitro) and microscopic evidence (using filipin as the cholesterol stain), demonstrating that in cells containing the NPC1 mutation, cholesterol accumulated in late endosomal/lysosomal compartments. We therefore consider this possibility unlikely.] This interpretation is consistent with the observation made by Slot and colleagues (36), who used electron microscopy and flow cytometry to examine PM cholesterol staining by BC
; they noted a sharp reduction of BC
staining signal at the cell surface when cells were prefixed with PFA. To explain this result, they suggested that the binding between BC
and membrane cholesterol may be inhibited by steric hindrance induced by crosslinking of membrane proteins when cells were fixed with PFA (36). Since PFA fixation seems to cause deformation/reorganization of the PM, it would not be appropriate to use the BC
staining method or the filipin staining to quantitate the relative distribution of cholesterol between the PM and the cell interior.
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-stained CHO cells grown in lipoprotein-containing medium. As a negative control, we used RA cells incubated with fluorescent streptavidin alone without BC
. As additional controls, we also included the WT CHO cells and mutant M19 cells in all of the experiments. The RA and CT cells contain a gain-of- function mutation in the protein SCAP (13). This property enables these cells to express the LDL receptor (LDLR) and various cholesterol biosynthetic enzymes at elevated levels constitutively. In contrast, the M19 cells lack the S2P gene that is essential for activating the SREBP pathway (41, 45). This property causes the M19 cells to express the LDLR and various cholesterol biosynthetic enzymes at levels significantly lower than those in the WT cells. Thus, grown in lipoprotein-containing medium, the RA cells and CT cells are expected to have a higher PM cholesterol content than the WT cells, while the M19 cells are expected to have a lower PM cholesterol content than the WT cells. The graph obtained from live-cell staining showed that indeed both RA and CT cells exhibited stronger fluorescence intensities than the WT cells, while the M19 cells exhibited weaker fluorescence intensities than the WT cells (Fig. 1B; results tabulated in Table 1, 3rd column). The results tabulated in Table 1, column 4, also showed that the RA cells and CT cells had greater percentages of cells with a strong positive signal than the WT cells, while the M19 cells had a much lower percentage of cells exhibiting a strong positive signal than the WT cells. We also noted that the average fluorescence signal was slightly higher in CT cells than in RA cells. This observation was consistently seen in three separate experiments. These results suggest that the bulk PM cholesterol content may not be significantly altered in the CT cells. We next performed additional flow cytometric experiments on cells stained with BC
using RA, CT, WT, and M19 cells prefixed with 1% PFA, or with 4% PFA. The quantitation is shown in the second and third rows of Table 1. Under the 1% PFA fixation condition (where cell surface staining is dominant; Fig. 1A), CT cells still showed slightly higher levels of BC
staining signal than those of RA cells or the WT cells, while the M19 cells showed the least amount of BC
staining signal. Under the 4% PFA fixation condition, higher percentages of strong positive cells were observed in all four cell types. The intensity of the BC
signal was considerably stronger in CT cells; it decreased in RA cells, WT cells, and M19 cells in sequential order. This result supports the interpretation that under this condition, most of the signal comes from staining of cholesterol accumulated intracellularly, and indicate that under the 4% PFA fixing condition, CHO cells become suitable for intracellular staining using BC
without the need for any additional permeabilization procedure. Various conventional procedures, including treating cells with digitonin, methanol, or other detergents, could be employed to permeabilize cells; however, these procedures may not be able to preserve cholesterol-rich domain(s) present intracellularly.
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staining signal with filipin staining signal
staining with filipin staining, we grew RA and CT cells in medium A (containing FBS) or in medium D (containing delipidated FBS), performed parallel labeling experiments, then viewed cells using fluorescence microscopy. When cells were grown in medium A, BC
was able to stain intracellular cholesterol in both RA and CT cells, with CT cells exhibiting a considerably greater signal (Fig. 2A
; 1st and 3rd frames on the left). In contrast, filipin was able to stain intracellular cholesterol in CT cells but not in RA cells (Fig. 2A; 1st and 3rd frames on the right). When cells were incubated in the medium containing delipidated FBS (medium D) for 16 h, intracellular cholesterol content was reduced in both the RA cells and the CT cells, as shown by BC
staining (Fig. 2A; left frames). Under the same conditions, filipin staining could show the decrease in intracellular cholesterol content in CT cells, but not in RA cells (Fig. 2A; right frames). These results demonstrate that BC
is superior to filipin for staining cholesterol-rich domains in intracellular organelles. In additional experiments, we found that sequential incubations of BC
followed by filipin completely abolished the filipin signal in NPC1 cells, implying that filipin may be targeted to the same cholesterol-rich domains intracellularly as BC
is (data not shown).
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staining of CT cells
staining in CT cells, we prepared a construct that consists of an NPC1-GFP, and introduced it into CT cells by transient transfection. Previously, NPC1-GFP has been used as a tool to study the trafficking and function of the NPC1 protein in transfected cells (46, 47). After BC
staining, the same cells were viewed in the red channel (for viewing the BC
signal) or in the green channel (for viewing the NPC1-GFP signal); the two signals were then merged to examine their degree of overlap. As shown in the upper frames of Fig. 2B, cells expressing NPC1-GFP exhibit a significantly reduced BC
staining signal compared with cells that do not express the fusion protein; no overlap was observed between the red and green channels. As a control, CT cells expressing only GFP did not show reduced BC
staining (data not shown). U18666A is a polyamine-containing compound that induces an NPC-like phenotype when added to cells expressing a normal NPC1 (18, 48). When U18666A was incubated with CT cells that express the NPC1-GFP, the intracellular cholesterol staining by BC
persisted (Fig. 2B; bottom two frames from the left). Merging these two frames showed that the BC
staining significantly overlapped with the GFP signal (Fig. 2B; bottom frame from the right). Thus, the intracellular cholesterol-rich domain visualized by BC
staining significantly colocalized with the compartment(s) that contains the NPC1-GFP in U18666A- treated cells. Previously, Strauss, Blanchette-Mackie, and colleagues, who used filipin as the intracellular cholesterol stain (49), made the same observation. It has been suggested that U18666A creates the NPC-like phenotype by "freezing" the NPC1 protein on the surface of cholesterol-laden lysosomes (47). The results described in Fig. 2B thus reinforce the conclusion that the cholesterol-rich compartment(s) stained by BC
in NPC1 cells is probably the same compartment(s) stained by filipin.
Effect of cyclodextrin on intracellular BC
staining of RA and CT cells
ß-Cyclodextrin (CD) is a cyclic oligosaccharide that specifically and rapidly removes free cholesterol from the cell membranes when added in the growth media (50). We used BC
staining to study the change in the intracellular distribution of cholesterol in RA and CT cells treated with hpCD. Upon treating cells with 4% hpCD for 10 min, both cell lines retained most of the BC
signals, suggesting that under this condition, only cholesterol at the cell surface is easily accessible to CD. When the CD incubation time was prolonged to 60 min, RA cells exhibited much less BC
signal, whereas CT cells still retained much of the signal (Fig. 2C). These results suggest that the intracellular cholesterol pool in RA cells is relatively sensitive to CD extraction, while most of the intracellular cholesterol pool in CT cells is relatively resistant to CD extraction. Thus, the new method can be used to monitor the intracellular cholesterol removal process in a visual manner.
Intracellular BC
stainings in other cell types
To extend our findings in cells other than the CHO cells, we performed intracellular BC
stainings in human and mouse fibroblasts. Both normal and NPC1 human fibroblasts grown in medium A exhibited intracellular cholesterol staining, with much greater signals present in the NPC1 cells (Fig. 3A
; left frames). When cells were incubated with medium D for 36 h, normal cells lost most of the BC
staining signal, while the NPC1 cells retained much of the signal (Fig. 3A; middle frames). When cells were incubated with medium D for 120 h, the staining signal was essentially cleared in both cell types. We also examined the intracellular BC
stainings in embryonic fibroblasts isolated from normal, NPC+/-, or NPC-/- mice. Fibroblasts grown in medium A showed intensities of intracellular BC
staining in the order of NPC1-/- > NPC1+/- > NPC1+/+ (Fig. 3B; left frames). When cultured in medium D for 48 h, both the NPC1+/+ cells and NPC1+/- cells lost much of the BC
staining signal. In contrast, the NPC1-/- fibroblasts still retained much of the signal.
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and the cholesterol-rich domains inside the cells, at present we do not know whether BC
binds to cholesterol present in the phospholipid bilayer of the vesicles, or binds to the cholesterol-phospholipid complex within the vesicles. Despite this reservation, we have demonstrated a method for staining cholesterol-rich domains intracellularly in various NPC cells that is much more sensitive than the filipin staining method. For future work, we will use BC
as a tool to study various cholesterol trafficking events inside the normal and NPC cells in a visual manner. The application of this methodology may help the investigators understand cellular cholesterol metabolism and trafficking processes under various normal and pathophysiological conditions. | ACKNOWLEDGMENTS |
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Manuscript received September 29, 2002 and in revised form December 5, 2002.
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