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Journal of Lipid Research, Vol. 45, 194-201, January 2004 Osmotic shock stimulates de novo synthesis of two cardiolipins in an extreme halophilic archaeon
* Dipartimento di Fisiologia Generale ed Ambientale, Università di Bari, Bari, Italy Published, JLR Papers in Press, September 16, 2003. DOI 10.1194/jlr.M300329-JLR200
1 To whom correspondence should be addressed. e-mail: a.corcelli{at}biologia.uniba.it
The present report illustrates the response to osmotic stress of an extreme halophilic archaeon, Halorubrum sp., isolated from the saltern ponds of Margherita di Savoia in southern Italy. The hypotonic stress induces relevant changes in the membrane lipid composition: archaeal cardiolipin content markedly increases, whereas phosphatidylglycerol (PG) decreases. Membranes isolated from this archaeon after cell disruption by osmotic shock are highly enriched in archaeal cardiolipin and reveal the presence of a novel phospholipid. Electrospray ionization mass spectrometry and NMR analyses revealed that this novel lipid has the structure of a sulfo-diglyco-diether-phosphatidic acid, i.e., a phospholipid dimer or a novel cardiolipin analogue. As NMR analyses showed that the sugars in the novel phospholipid dimer are the same and in the same order of a sulfated diglycosyl diphytanylglycerol diether (S-DGD-5) present as a major lipid component in the archaeon membranes, the novel phospholipid dimer was named S-DGD-5-PA. We conclude that osmotic shock induces a specific increase in the membrane content of the two cardiolipins and suggest that PG and S-DGD-5 are intermediates for the de novo synthesis of archaeal cardiolipin and S-DGD-5-PA, respectively.
Abbreviations: BPG, bisphosphatidylglycerol or cardiolipin (diphytanylglycerol ether analogue); BR, bacteriorhodopsin; ESI-MS, electrospray ionization mass spectrometry; GlyC, glycocardiolipin or 3-HSO3-Galp-ß1,6-Manp- Supplementary key words archaeal cardiolipin sulfated diglycosyl diphytanylglycerol diether phosphatidic acid halophiles ARCHAEA
Cardiolipin, a dimeric phospholipid discovered in heart mitochondria, plays an important role in the function and stability of many enzymatic complexes of the respiratory chain (1). A number of substituted cardiolipins or cardiolipin analogues have been described in bacteria (24); the function of these cardiolipin analogues in bacteria is still unclear. Both authentic cardiolipin and cardiolipin analogues are composed of two diacylglycerol moieties and therefore possess four hydrophobic chains. Cardiolipins have also been found in the Archaea world (5, 6). The first evidence of the presence of archaeal cardiolipin was found in Halobacterium salinarum, in which a bisphosphatidylglycerol (BPG) and another phospholipid dimer composed of the glycolipid sulfated triglycosyl diphytanylglycerol diether-1 (S-TGD-1) esterified to phosphatidic acid (PA) have been described [S-TGD-1-PA, also called glycocardiolipin (GlyC)] (5). GlyC, a major lipid component of the purple membrane (PM) of H. salinarum, plays an important role in the function and stability of bacteriorhodopsin (BR), the photoactivated proton pump (7), whereas BPG is only a minor lipid of PM (5, 8). Interestingly, it has been shown that the amount of GlyC in the PM of H. salinarum increases when the cells are exposed to hypotonic shock and that the formation of GlyC occurs at the expense of S-TGD-1 (9). In the present report, we show that a halo-archaeal isolate collected from the salterns of Margherita di Savoia in southern Italy, which is closely related to Halorubrum trapanicum, actively synthesizes high amounts of the archaeal cardiolipin BPG under osmotic shock. Membranes isolated after cell disruption by osmotic shock are highly enriched in this archaeal cardiolipin and reveal the presence of a novel phospholipid. The novel phospholipid has been isolated and identified as S-DGD-5-PA, i.e., a phospholipid dimer composed of the glycolipid S-DGD-5 (a sulfo-diglycosyl-diether) esterified to PA. We demonstrate that osmotic shock specifically induces an increase in the content of both archaeal cardiolipins and suggest that the archaeal cardiolipin and the novel cardiolipin analogue S-DGD-5-PA are synthesized at the expense of phosphatidylglycerol (PG) and the glycolipid S-DGD-5, respectively.
Materials DNase I was obtained from Sigma (St. Louis, MO); all organic solvents used were commercially distilled and of the highest available purity (Sigma-Aldrich). Plates for TLC (Silica gel 60A; 20 x 10 cm, layer thickness 0.2 mm) were obtained from Merck.
Microorganism culture Cells at the stationary growth phase were harvested by centrifugation and immediately used for lipid extraction or processed for membrane isolation.
Sequencing of 16S rRNA
Membrane isolation
Time course of archaeal cardiolipin increase and PG decrease in cells diluted in low-salt medium
Cell disruption by French press
Lipid extraction
TLC
Isolation and purification of individual archaeal lipids
Quantitation of individual lipids of the total extracts
Mass spectrometry
NMR spectroscopy
In this study, we have investigated the lipid composition of an extremely halophilic archaeon with a high archaeal cardiolipin content under osmotic stress. The extremely halophilic microorganism used in the present study, MdS1, was isolated from the salterns of Margherita di Savoia in southern Italy. Analysis of the 16S rRNA gene sequence clearly places the isolate used in the present study within the Halorubrum cluster: in the 513 nts determined (positions 9101,421, H. halobium numbering), only 8 nts varied from the closest match, H. trapanicum (98.5% similarity), indicating a close relationship consistent with two strains of the same or closely related species. Therefore, it seems appropriate to refer to the isolate as Halorubrum sp. (F. Rodriguez-Valera, personal communication). In agreement with the 16S rRNA analyses, the presence of a sulfo-diglycosyl-diacylglycerol in the total cell lipid extract (see below) is consistent with the placement of the MdS1 isolate in the Halorubrum genus.
Initially, we analyzed by TLC (Fig. 1)
the lipid composition of MdS1 cells suspended in 4 M NaCl (lane C) and cell lysate after dialysis against water (lane D). The individual lipid components of the extracts were identified by their retention factor (Rf) values relative to those of authentic standard markers, by their staining behavior with specific reagents (not shown), and by negative ion ESI-MS spectra of isolated individual lipids. The main lipid components present in both lipid extracts were identified (in Rf order) as monosulfated diglycosyl diphytanyl-glycerol (S-DGD), phosphatidylglycerosulfate (PGS), phosphatidylglycerophosphate methyl ester (PGP-Me), PG, and the archaeal cardiolipin BPG, plus the pigments at the solvent front. The abbreviated names of purified individual lipids are also reported in Fig. 1. As it is known that H. trapanicum contains a glycolipid called S-DGD-5 (2-HSO3-Manp-
Comparing the two lipid extracts, it is evident that the lipid extract of lysed cells contains a higher archaeal cardiolipin content and a lower PG content than does the lipid extract of whole cells. An unidentified lipid (the third band from the bottom) is present only in the lipid profile of lysed cells by dialysis. As shown previously for the GlyC of the PM of H. salinarum, the data in Fig. 1 suggest that archaeal cardiolipin is formed when haloarchaeal MdS1 cells are exposed to hypotonic stress. To study in detail the response of MdS1 cells to osmotic stress, we have studied in parallel the osmotic fragility of the cells exposed to hypotonic medium and the changes in membrane lipid composition. Figure 2 shows the time course of the development of osmotic fragility of MdS1. The cells, initially resuspended in 4 M NaCl, were diluted 5-fold or 10-fold with 0.1 M NaCl. MdS1 cells seem to adapt quite well to an external medium containing 0.8 M NaCl: they swell but do not disrupt. We have reported previously that cells of a genetically engineered strain of H. salinarum suspended in 0.8 M NaCl are easily disrupted (9). On other hand, MdS1 cells quickly disrupt when the extracellular medium contains only 0.4 M NaCl; it took less than 15 min for the cells to become 50% fragile and 90 min for the cells to become 80% fragile.
To follow the changes in the lipid composition of MdS1 cells undergoing osmotic shock, lipids were extracted from equivalent aliquots of cells, suspended in hypotonic medium, and taken at different times from the start of osmotic stress. The TLC results in Fig. 3 show that changes in the lipid composition of cells occurred just after resuspension in 0.8 M NaCl. Archaeal cardiolipin increased continuously in cells resuspended in hypotonic medium; it is evident that archaeal cardiolipin increased at the expense of PG. A similar pattern of changes in lipid composition was found in disrupting cells suspended in 0.4 M NaCl or in the dialysis bag (not shown).
We have estimated by video densitometric analyses the amount of individual lipids in the TLC (Fig. 3A). The standard curves for the individual lipid components of MdS1 cells were linear in the concentration range 110 µg. Figure 3B shows the time course of changes in archaeal cardiolipin and the PG content of the incubation mixture during osmotic shock, relative to the experiment shown in Fig. 3A. After 3 h of incubation of MdS1 cells in 0.8 M NaCl, 3 nmol of newly formed archaeal cardiolipin over 40 µg of total lipid extract were found, corresponding to the disappearance of 3 nmol of PG. Furthermore, analyzing the plate shown in Fig. 3A, the unidentified lipid present in the extract of dialyzed cells (Fig. 1, lane D) could not be detected. This suggests that the novel lipid can be observed only when the cells disrupt by osmotic shock and not in intact swelling cells. Therefore, to identify the unidentified lipid component, we isolated a membrane fraction containing this lipid from the cell lysate. By comparing by TLC (Fig. 4A) the lipid profiles of cells suspended in isotonic medium (lane C) and isolated membranes (lane M), it is evident that the presence of the unidentified lipid, named "band 3," occurs among membrane lipids only. The same lipid extracts were also analyzed by ESI-MS (Fig. 4B): the main peaks of the lipid extracts of cells (upper panel) were identified as PG at m/z 805.7, S-DGD-5 at m/z 1,055.8, and PGP-Me at m/z 899.6, whereas PGS at m/z 886 and the archaeal analogue of cardiolipin, BPG, at m/z 760 as a bicharged peak appear to be minor components. At m/z 731.7, the fragment ion diagnostic of the archaeal core is also present.
The ESI-MS spectrum of the lipid extracts of isolated membranes (Fig. 4B, lower panel) confirms that archaeal cardiolipin (at m/z 760.1) is highly enriched in the lipid extract of membranes, compared with that of whole cells, whereas PG (at m/z 806.1) is significantly reduced, in agreement with TLC data. An unidentified peak (at m/z 885.1) can be observed in the lipid profile of the membranes. All of the individual lipids present in the lipid extract of archaeal cardiolipin-rich membranes have been isolated, purified, and analyzed by TLC and ESI-MS (Table 1).
TLC results from isolated and purified band 3 are shown in Fig. 5A . This lipid gave a positive test on TLC plates for sugar, sulfate, and phosphate, indicating that it is a sulfo-glyco-phospholipid. ESI-MS (negative mode) analysis (shown in Fig. 5B) of the purified glycolipid showed [M-H]- and [M-2H]2- parent ions as well as some fragmentation ions. The main ion peak is the bischarged molecular ion [M-2H]2- at m/z 884.4, and the monocharged molecular ion is present at m/z 1770.7 along with [M-2H-Na]- at m/z 1792.7 as a minor peak. Fragmentation ions present at m/z 79.0 and 96.8 are diagnostic of a phosphate group ([PO3-/H2PO4-] ion pair); the less-intense ion peak at m/z 1690.5 is diagnostic for the loss of a labile sulfate group ([M-SO3]- = 1770.7-80 = 1690.7). Also, the fragmentation ions at m/z 731, 1056, and 241 correspond to the archaeal analogue of PA, to S-DGD-5, and to a sugar phosphate or sulfate group, respectively.
The fragmentation pattern of the novel sulfo-glyco-phospholipid appears to be very similar to that of S-TGD-1-PA or GlyC, previously characterized in the PM isolated from H. salinarum (5), suggesting that band 3 consists of a sulfodiglycosyl-diphytanylglycerol esterified to the phosphate group of PA, i.e., an S-DGD-5-PA.
MS-MS analysis of purified band 3 (Fig. 5C) confirmed the proposed structure. To compare the sugars present in the novel lipid with those present in the major glycolipid of MdS1, we have analyzed isolated from MdS1 membranes NMR in parallel the sulfodiglycosyl-diphytanylglycerol by proton and band 3. The NMR spectrum of band 3 (Fig. 6
, upper panel) in the region characteristic of glycosyl protons (3.25.1 ppm) was identical to that of S-DGD-5 (Fig. 6, lower panel). In particular, the two anomeric proton signals (doublets) present in the spectrum of band 3 had the same chemical shifts as those in the spectrum of S-DGD-5; these doublets, centered at
Together, these data reveal that the lipid composition of disrupted cells after dialysis and of membrane fractions isolated from these dialyzed cells are different from those of whole cells in isotonic medium because of the increased archaeal cardiolipin content and the appearance of the novel phospholipid dimer S-DGD-5-PA. Finally, to test our hypothesis that it is the osmotic shock that induces de novo synthesis of the two cardiolipins in MdS1 cells, we analyzed total lipids extracted from cells mechanically disrupted by French press and from membranes isolated from these disrupted cells. The TLC results shown in Fig. 8 demonstrate that the lipid profiles of cells disrupted by French press (lane C FP) and isolated membrane (lane M FP) were very similar to that of whole cells (lane C). In particular, the archaeal cardiolipin did not significantly increase in either the disrupted cell profile or the membrane profile, and no band 3 was present in the membrane isolated under these experimental conditions.
Osmotic stress is a common challenge encountered by many life forms. The behavior of the cell envelopes under different osmotic conditions has not been extensively explored. Nevertheless, several lines of evidence suggest that cell envelope composition plays an important role (14, 15). Previous results demonstrated that in some microorganisms, the removal of the cell wall affects the composition of the plasma membrane (16). It also has been reported that important variations in membrane lipid composition occur in Bacillus subtilis during osmoadaptation; when the bacteria were grown in hypertonic medium, a decrease in PG and an increase in cardiolipin content were observed (17). Similar changes have been seen in other bacteria, such as Escherichia coli (18) and Staphylococcus aureus (14) cultured in hypersaline medium. Furthermore, an increase in the amount of glycolipids was observed in B. subtilis (17) and in Saccharomyces cerevisiae (15) growing in hypertonic NaCl medium. Changes in lipid composition also occur when microorganisms living in high-salt medium are subjected to hypotonic stress. The archaeal GlyC is normally absent in H. salinarum, but relevant amounts of it were found in cells lysed by osmotic shock (9). Archaeal cardiolipin cell content also increased in the same cells upon osmotic shock, but this phenomenon could not be examined in detail because of the low archaeal cardiolipin cell content (9). As archaeal cardiolipin-enriched membranes were found in an extremely halophilic microorganism of the genus Halorubrum (19), we thought that this microorganism could represent a good cellular system in which to investigate archaeal cardiolipin formation by osmotic shock. In this study, we found that upon osmotic downshift, the cells of the halophilic microorganism Halorubrum sp. isolated from salterns of Margherita di Savoia (Italy) synthesize archaeal cardiolipin. We were able to quantitate the amount of synthesized archaeal cardiolipin by TLC video densitometry, and by comparing the quantities of various lipid components in the lipid extracts of swelling cells, we found that a decrease of PG occurs that corresponds to the archaeal cardiolipin increase. The fact that the archaeal cardiolipin increase did not occur in the lipid extracts of cells disrupted by French press and of membranes isolated from this cell lysate suggests that the formation of cardiolipin during dialysis is attributable specifically to osmotic shock. The present report also demonstrates the presence of a novel phospholipid dimer in Halorubrum sp. and shows that a membrane fraction isolated from this archaeon after cell disruption by osmotic shock is highly enriched in both archaeal cardiolipin and the novel phospholipid. ESI-MS and NMR analyses revealed that the novel phospholipid has the structure of a sulfo-glyco-diether-PA, namely S-DGD-5-PA. In fact, NMR analyses showed that the sugars in the novel phospholipid are the same and in the same order as those of the glycolipid S-DGD-5 isolated from the Halorubrum membranes, in which the sulfated mannose is linked to glucose. We could not study the time course of S-DGD-5-PA synthesis because of its low content in MdS1 cells; on the other hand, the relatively high amount of S-DGD-5 does not easily allow the recording of small decreases. We suggest that the change in phospholipid composition induced by osmotic shock is attributable to de novo synthesis of the two cardiolipins, BPG and S-DGD-5-PA, at the expense of PG and S-DGD-5, respectively. Furthermore, S-DGD-5-PA formation can be detected only after cell disruption by osmotic shock, whereas the archaeal cardiolipin increase can be observed in intact swelling cells as well. Therefore, the two synthesis pathways of Halorubrum could be influenced and regulated by osmotic stimuli of different intensities, and the rate of synthesis of the two cardiolipins could be different. The changes in the lipid composition of the representative of the genus Halorubrum described in the present study are analogous to those recently observed in other halophiles of the genus Halobacterium (9). Previously, we demonstrated that the phospholipid dimer S-TGD-1-PA is present in very low amounts in the cells of H. salinarum under physiological conditions and is synthesized de novo during cell lysis by osmotic shock at the expense of the glycolipid S-TGD-1. Whether the cardiolipin analogue syntheses require specific enzymes it still not clear. Is a cardiolipin synthase active in the archaeal microorganisms? Are there other enzymes required to synthesize S-DGD-5-PA in Halorubrum and S-TGD-1-PA in Halobacterium? Further studies are required to address these questions. At present, we cannot exclude the possibility that these phospholipid dimers could be chemically, rather than enzymatically, synthesized. Indeed, in our previous study on the S-TGD-1-PA of the PM of H. salinarum (9), we noted that in the PM, in which S-TGD-1-PA is abundant after osmotic shock, a specific enzyme to synthesize this lipid does not exist. It is well known that the only protein of the PM is BR and that no other proteins are present. The Halorubrum cells used in the present study adapt to osmotic downshift better than a genetically engineered strain of H. salinarum cells characterized previously (9). Therefore, we hypothesize that higher archaeal cardiolipin cell content could protect the cell from lysis. The archaeal cardiolipin increase that occurs in cells undergoing osmotic shock may represent the physiological response of the microorganisms to low external osmolarity. The modifications in lipid composition could affect the physicochemical properties of the membrane such as bilayer thickness, membrane fluidity, and transport properties. Recently, some types of mechanically gated (MG) channels have been identified in Archaea. These channels are implicated in myriad physiological processes and, like bacterial MG channels, are activated by mechanical force transmitted via the lipid bilayer (20). Hoch (21) argues that the conversion of two PG molecules to cardiolipin plus glycerol increases the order on the membrane surface and that cardiolipin may be engaged in the regulation of ionic lateral conduction by the plasma membrane, because it is well known that the glycerol moiety of the cardiolipin molecule takes part in the lateral conduction of protons through H-bonded networks. The increase in cardiolipin concentration might serve as a barrier against the high ionic level or contribute to the active transport (14). In addition, the free glycerol, a well-known osmoprotectant, could contribute to the resistance of the cell to osmotic stress. On the other hand, recent work on the ABC transport system of Lactococcus lactis showed that this system senses osmotic stress through alterations in membrane physicochemical properties. The electrostatic interactions between phospholipids and the transporter, in particular the polar lipid fraction, are essential to the osmosensing mechanism (22). In summary, this work indicates that during the adaptation of cells to hypoosmolarity, the membrane undergoes significant biochemical and structural changes in terms of increased cardiolipin content. We are directing our research toward further clarification of the role of the two archaeal phospholipid dimers in the studied microorganism. In a preliminary study, we have shown that archaeal cardiolipin is tightly bound to a cytochrome c oxidase (19), whereas the function of S-DGD-5-PA is still unknown.
The authors thank Sergio Papa for useful discussion, Francisco Rodriguez-Valera (Universidad M. Hernandez, Alicante, Spain) for 16S rRNA sequencing and analysis, Salvatore E. Carulli for microorganism cultivation, and Istituto di Chimica dei Composti Organo Metallici, Sezione di Bari, Consiglio Nazionale delle richerche, for NMR analyses. This work was supported by PRIN 20022003 of the Ministero Italiano dell'Università e della Ricerca Scientifica and by the Istituto per i Processi Chimico-Fisici, Consiglio Nazionale delle Ricerche (Bari unit, Italy). Manuscript received July 25, 2003 and in revised form September 8, 2003.
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