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Journal of Lipid Research, Vol. 45, 1624-1632, September 2004 Quantitative trait loci that determine plasma lipids and obesity in C57BL/6J and 129S1/SvImJ inbred mice
* The Jackson Laboratory, Bar Harbor, ME Published, JLR Papers in Press, June 21, 2004. DOI 10.1194/jlr.M400098-JLR200
1 To whom correspondence should be addressed. e-mail: bjp{at}jax.org
The plasma lipid concentrations and obesity of C57BL/6J (B6) and 129S1/SvImJ (129) inbred mouse strains fed a high-fat diet containing 15% dairy fat, 1% cholesterol, and 0.5% cholic acid differ markedly. To identify the loci controlling these traits, we conducted a quantitative trait loci (QTL) analysis of 294 (B6 x 129) F2 females fed a high-fat diet for 14 weeks. Non-HDL cholesterol concentrations were affected by five significant loci: Nhdlq1 [chromosome 8, peak centimorgan (cM) 38, logarithm of odds [LOD] 4.4); Nhdlq4 (chromosome 10, cM 70, LOD 4.0); Nhdlq5 (chromosome 6, cM 0) interacting with Nhdlq4; Nhdlq6 (chromosome 7, cM 10) interacting with Nhdlq1; and Nhdlq7 (chromosome 15, cM 0) interacting with Nhdlq4. Triglyceride (TG) concentrations were affected by three significant loci: Tgq1 (chromosome 18, cM 42, LOD 3.2) and Tgq2 (chromosome 9, cM 66) interacting with Tgq3 (chromosome 4, cM 58). Obesity measured by percentage of body fat mass and body mass index was affected by two significant loci: Obq16 (chromosome 8, cM 48, LOD 10.0) interacting with Obq18 (chromosome 9, cM 65). Knowing the genes for these QTL will enhance our understanding of obesity and lipid metabolism.
Abbreviations: BMI, body mass index; cM, centimorgan; LOD, logarithm of odds; % fat, percentage of body fat mass; PLTP, phospholipid transfer protein; QTL, quantitative trait loci; SSLP, simple sequence length polymorphic; TG, triglyceride Supplementary key words body fat mass body mass index high-fat diet non-high density lipoprotein cholesterol quantitative trait loci triglyceride
Cardiovascular disease is often coincident with dyslipidemia, obesity, hypertension, and diabetes, which are often clustered in some individuals and recognized as metabolic syndrome (1). These disorders are complex, multifactorial, and controlled by both environmental and genetic factors. The causal relationship between the risk of cardiovascular disease and either obesity or increased LDL cholesterol or triglyceride (TG) is definitively established. Much is known about the nature and effect of environmental factors, yet relatively little is known about the genetic basis of these disorders. Thus, knowledge of the primary genetic determinants of plasma lipoprotein levels and obesity will enhance our understanding of the pathophysiological background and may provide novel molecular targets for intervention. Mouse crosses have helped to localize and identify genes underlying these complex traits (25). When exposed to a high-fat diet, mice of different inbred strains exhibit great variation in plasma lipoproteins and obesity (6). Our laboratory has used quantitative trait loci (QTL) analysis to investigate the genetics underlying lipoprotein metabolism and atherosclerosis (5, 7). The number of genetic loci that differ between C57BL/6J (B6) and 129S1/SvImJ (129) mice underscores the importance of strain background when evaluating the impact of a gene deficiency in targeted mutant mice. In most cases, targeted mutant mice are derived from embryonic stem cells of 129 mouse substrains. A target gene in these cells is "knocked out" by homologous recombination, and the resulting cells are microinjected into B6 blastocysts, which develop into B6/129 chimeras. These in turn are mated to B6 mice to produce mice heterozygous for B6 and 129 alleles at all loci for which these strains differ. These mice are intercrossed to generate mice homozygous for 129 alleles at the target locus (/) and a small region surrounding it, but the remainder of their genomes are a random mixture of B6 and 129 alleles (8). If littermates of such mixed-background targeted mutant stocks differ in their allelic combinations, they could yield different experimental results. Thus, to evaluate gene function in targeted mutant mice, the genetic background must be carefully controlled by constructing B6/129 congenic strains. This is carried out by successively backcrossing carriers of the targeted mutation to B6 mice until the only 129 alleles left on a nearly pure B6 background are the target locus (/) and the surrounding genetic materials (9). We report here the results of our investigation of plasma non-HDL cholesterol levels, TG concentrations, and obesity among (B6 x 129) F2 females that had for 14 weeks consumed a high-fat diet containing 15% dairy fat, 1% cholesterol, and 0.5% of the hydrophobic bile acid cholic acid, which promotes cholesterol absorption. Previously, we reported QTL detected with this intercross that determine plasma HDL-cholesterol levels and atherosclerosis susceptibility (10). In this study, we identified several QTL for non-HDL cholesterol, TG, percentage of body fat mass (% fat), and body mass index (BMI).
Animals and diet B6 and 129 mice were obtained from The Jackson Laboratory (Bar Harbor, ME) and mated to produce the (B6 x 129) F1 progeny, which were intercrossed to produce an F2 population of which the 301 female F2 progeny were used in this investigation. Mice were maintained in a temperature- and humidity-controlled environment with a 14 h light/10 h dark cycle and given unrestricted access to food and acidified water. The cages were covered with polyester filters and contained pine shavings bedding. Six week old mice were fed a high-fat diet (11, 12) containing 15% dairy fat, 1% cholesterol, and 0.5% cholic acid for 14 weeks, after which they were killed by cervical dislocation. Experiments were approved by the Institutional Animal Care and Use Committee of The Jackson Laboratory.
Quantitative phenotype measurements
Genotyping
Statistics
Naming QTL
Inheritance of plasma non-HDL and TG levels, % fat, and BMI Plasma non-HDL and TG concentrations, % fat, and BMI were measured after animals had been fed the high-fat diet for 14 weeks (Table 1). Compared with 129, B6 mice displayed significantly increased non-HDL levels. The F1 mice displayed non-HDL levels intermediate between and significantly different from those of the parental strains; thus, high non-HDL cholesterol levels were inherited in an additive manner. Compared with 129, B6 mice displayed significantly decreased plasma TG levels. The F1 mice displayed TG levels comparable to those of strain B6 and significantly lower than those of strain 129; thus, high TG levels were inherited in a recessive manner. B6 mice displayed significantly lower % fat than did 129 mice, and the F1 mice displayed intermediate values between those of the parental strains. The BMI distribution was similar to that for % fat; B6 mice displayed significantly lower BMI compared with 129 mice. The F1 mice displayed BMI values intermediate between the parents but closer in value to those of strain 129. We started with 301 F2 females and quantified each trait of 294 females after the 14 week high-fat diet. Log-transformed non-HDL, TG, % fat, and log-transformed BMI were normally distributed among the F2 progeny (Fig. 1AD) . The log BMI was positively correlated with TG and % fat but negatively correlated with log-transformed non-HDL (Table 2).
Identification of genetic loci affecting non-HDL and TG concentrations, % fat, and BMI The genome-wide scans for single QTL are presented in Fig. 1 and summarized in Table 3, which provides the QTL peak, 95% confidence interval, LOD score, allele conferring the high value, nearest SSLP marker to QTL peak, overlapping QTL reported previously, and candidate genes for each QTL. The QTL were named if they were significant either as single QTL or interacting QTL. Suggestive QTL in this cross that were found previously were also named. We named the loci Nhdlq for non-HDL QTL, Tgq for TG QTL, and Obq for obesity QTL, in each case followed by a number. Figure 2 shows the allele effects, which demonstrate the magnitude of the effect and the inheritance pattern (dominant, recessive, or additive).
For plasma non-HDL concentrations, the genome scan is shown in Fig. 1A. The significant chromosome 8 QTL (Fig. 2A; peak LOD 4.4), named Nhdlq1, had a dominant B6 allele for increased non-HDL concentrations (Fig. 2B). This locus confirmed a QTL identified earlier using strains CAST and 129 (19). Nhdlq4, on chromosome 10 (Fig. 2C; peak LOD 4.0), caused higher non-HDL when homozygous for a recessive 129 allele (Fig. 2D). Two suggestive QTL were discovered at the D6Mit86 locus and the D7Mit141 locus. The pairwise genome scan revealed three significant interactions. Nhdlq1 interacted with the D7Mit294 locus, which we named Nhdlq6. Nhdlq6 did not affect non-HDL concentrations by itself, but its effect in combination with Nhdlq1 on non-HDL was strong (Fig. 3A) . When the Nhdlq1 genotype was B6/B6, homozygosity for a recessive allele from strain 129 at Nhdlq6 contributed significantly to increase non-HDL. A second significant interaction was found between Nhdlq4 and the D6Mit86 locus, named Nhdlq5, which was suggestive as a single QTL (Fig. 3B). When the Nhdlq4 genotype was 129/129, the contribution of a recessive B6 allele for increased non-HDL at Nhdlq5 became significant. A third interaction was found between Nhdlq4 and the D15Mit13 locus, which we named Nhdlq7. Nhdlq7 did not affect non-HDL by itself, but its combined effect with Nhdlq4 on non-HDL was dramatic (Fig. 3C). When the Nhdlq4 genotype was 129/129, homozygosity for a recessive B6 allele at Nhdlq7 significantly increased plasma non-HDL.
For plasma TG concentrations, we found a significant locus on chromosome 18, which we named Tgq1 (Fig. 2E; peak LOD 3.2) and two suggestive loci on chromosomes 9 and 14. At Tgq1, the heterozygous B6/129 genotype was associated with significantly increased TG concentrations (Fig. 2F). The pairwise genome scan revealed that an interaction at D9Mit281 and D4Mit308, which we named Tgq2 and Tgq3, respectively, affected plasma TG concentrations with statistical significance (Fig. 3D). When the Tgq3 genotype was 129/129, homozygosity for a recessive strain B6 allele at Tgq2 contributed significantly increased TG. For obesity measured by % fat, the genome scan is shown in Fig. 1C. The significant chromosome 8 QTL named Obq16 (Fig. 2G; peak LOD 10.0) had an additive 129 allele for higher % fat (Fig. 2H). Three suggestive QTL were discovered on chromosomes 1, 6, and 12. The D6Mit86 locus confirmed a QTL, Mob2, identified earlier using strains B6 and SPRET (20). We named this locus Mob2 in the present cross, which shared the parental strain B6 in common with the earlier cross. The D1Mit495 locus confirmed adjacent QTL, Obq8 and Obq9, identified earlier using strains NZO and SM (21). We named this locus Obq17 in the present study. The pairwise genome scan revealed a significant interaction between Obq16 and the D9Mit281 locus, which we named Obq18. Obq18 was not shown to affect % fat by itself, but its combined effect with Obq16 on % fat was dramatic (Fig. 3E). When the Obq16 genotype was 129/129, an additive/codominant allele for higher % fat from strain B6 at Obq18 contributed a significant effect.
For obesity measured by BMI, the genome scan is shown in Fig. 1D. Three suggestive QTL were discovered on chromosomes 1, 8, and 17. The D17Mit143 locus confirmed QTL identified earlier using either strains AKR/J and C57L/J (22) or strains NZO and SM (21). The D8Mit248 locus confirmed a significant QTL, Obq16, identified for % fat in this cross. Thus, we gave this locus the same name, Obq16. The D1Mit406 locus colocalized a QTL, Obq17, identified for % fat in this cross and was given the same name. Two loci, the D2Mit285 locus and the D18Mit4 locus, exceeded the 37% genome-wide adjusted threshold (LOD
The multiple regression analyses (Tables 4 and 5) show the effect of each QTL and interactions when considered together. The percent of the total phenotypic variance in F2 mice is best estimated by a multiple regression analysis. For non-HDL, this multiple regression analysis confirmed six QTL and three interactions identified for single gene or pairwise genome-wide scans. Taken together, these QTL and their interactions explained 49.9% of the total F2 phenotypic variance; Nhdlq1 and Nhdlq4 contributed
In the present study, we describe two inbred mouse strains, B6 and 129, that display different plasma levels of non-HDL cholesterol and TG and degrees of obesity when fed a high-fat diet. Three-step QTL analyses on 294 (B6 x 129) F2 progeny resulted in the localization of six QTL for non-HDL, four QTL for TG, five QTL for % fat, three QTL for BMI, and five gene interactions. For plasma non-HDL concentrations, we identified four main-effect QTL (Nhdlq1, Nhdlq4, Nhdlq5, and the D7Mit141 locus) and two additional QTL by gene interactions (Nhdlq6 and Nhdlq7). Previously, our group mapped a chromosomal locus in a (CAST x 129) F2 intercross that determines non-HDL levels to chromosome 8 (cM 2060) and named it Nhdlq1 (19). Because the present study confirmed the previously reported QTL using a cross having a parental strain, 129S1/SvImJ, in common with the cross used in the earlier study, we named the locus Nhdlq1 in accordance with the International Committee on Standardized Genetic Nomenclature for Mice. Potential candidate genes for Nhdlq1 are the gene (Lpl; cM 33.0) coding for LPL and the gene (Cpe; cM 32.6) coding for carboxypeptidase E, which produces biologically active forms of proinsulin and proopiomelanocortin. Mice possessing the fat mutation (a spontaneous mutation in the Cpe gene) exhibited prominent obesity and higher plasma non-HDL concentrations relative to controls after consuming a high-fat diet (23). Nhdlq1 coincidentally colocalizes with a QTL for % fat, Obq16, in the present cross. Nhdlq6 maps to the region containing the apolipoprotein gene cluster (Apoc1, Apoc2, Apoc4, and Apoe; cM 4.0). Interestingly, APOC2 is a cofactor for LPL (24). The gene interaction between Nhdlq1 and Nhdlq6 makes Lpl and Apoc2 excellent candidates for genes underlying these QTL. Likewise, Nhdlq4 interacted independently with Nhdlq5 and Nhdlq7. These gene interactions may give clues to the candidate genes. Nhdlq4 colocalized with a QTL for phospholipid transfer protein (PLTP) activity, Pltp2, found previously using an (SM x NZB) F2 intercross (25). PLTP is responsible for the transfer of phospholipids from VLDL to HDL (26), suggesting that the gene underlying Nhdlq4 might determine plasma non-HDL levels by regulating PLTP activity. An excellent candidate gene for Nhdlq4 is the gene (Apof; cM 73.0) coding for a lipid transfer inhibitor protein, Apo F (27). Previously, our group reported a single nucleotide polymorphism that causes an amino acid change in the protein between B6 and 129 strains (25). For TG levels, we identified three main-effect QTL (Tgq1, Tgq2, and the D14Mit60 locus) and, by gene interactions, an additional QTL (Tgq3). Potential candidate genes for Tgq3 are the gene (Lepr; cM 46.7) coding for the receptor of leptin; the gene (Cpt2, cM 54.4) coding for a mitochondrial fatty acid transporter, carnitine palmitoyltransferase 2; and the gene (Angptl3, cM 48.5) coding for angiopoietin-like 3. Tgq2 colocalized with a QTL previously identified in a (B6 x KK-Ay) F2 intercross (28) but did not map near any genes known to play a prominent role in lipoprotein or lipid metabolism. Alternatively, genes underlying Tgq2 are entirely novel genes that might otherwise not have been considered. The interaction between Tgq2 and Tgq3 may give clues to the underlying genes' identities.
To identify genetic loci that affect the development of obesity in response to the high-fat diet, we measured two different traits that reflect obesity, % fat and BMI. For % fat, we identified four main-effect QTL (Obq16, Obq17, Mob2, and the D12Mit182 locus) and one additional QTL (Obq18) by its interaction with Obq16. For BMI, we identified three suggestive main-effect QTL (Obq16, Obq17, and Obq19). Because log BMI was positively correlated with % fat (P < 0.0001), two of three QTL for BMI, the D8Mit248 locus and the D1Mit406 locus, colocalized with QTL for % fat and for Obq16 and Obq17, respectively. The discrepancy between QTL obtained from these traits might be reflected from variations in body length. The suggestive D12Mit182 locus maps to the region of the gene (Pomc1; cM 4.0) coding for proopiomelanocortin- Reed and colleagues (33) carried out a study of both male and female progeny of an F2 intercross between mice of the C57BL/6ByJ and 129P3/J strains to identify QTL for body weight, body length, and adiposity. Of the QTL found in the present study, only Obq18 colocalized with a QTL for adiposity, Adip5, reported by Reed et al. However, these investigators reported that the effect of Adip5 is limited to F2 males and is not found in females (peak LOD < 1.0). Whereas a QTL on chromosome 16, Adip9, was found to interact with Adip5 by Reed et al., Obq18 interacted with Obq16 on chromosome 8 in the present study, suggesting that the gene underlying Adip5 is not identical to the one underlying Obq16. The QTL identified by Reed et al. in the (C57BL/6ByJ x 129P3/J) F2 cross are based on analyses of mice fed a normal chow diet, and it is unlikely that these loci would similarly affect the development of obesity in response to a high-fat diet. Indeed, obesity is a complex trait, reflecting the effect of a network of genes, and it is affected by diet, age, gender, and exercise (4).
Several spontaneous single-gene mutations causing obesity, such as agouti yellow (Ay), obese (Lepob), diabetes (Leprdb), fat (Cpe fat), tubby (Tubtub), and mahogany (Atrnmg), have been identified in inbred mice (34, 35). These mutations, however, do not account for the wide variation of obesity in the general human population. Some human pedigree studies provide clear genetic evidence of oligogenic or polygenic predisposition for obesity, indicating that obesity is a complex trait (36). Indeed, mice of different inbred strains exhibit wide variation in body weight and predisposition to spontaneous or diet-induced obesity. Multiple modifier genes likely contribute to the variation. Crosses between mice of various strains have identified The present study discovered five epistatic interactions for plasma non-HDL and TG concentrations and % fat (Fig. 3). The pairwise genome scans revealed four significant QTL, Nhdlq6, Nhdlq7, Tgq3, and Obq18, that did not affect traits by a single locus but affected the traits with the counterpart locus. When a genotype of one locus was B6/B6, homozygosity for a 129 allele at the counterpart locus contributed significantly to the effect on the trait. This evidence might facilitate in vitro assays to test candidate genes. In summary, by performing a QTL analysis of a (B6 x 129) F2 female cohort, we identified chromosomal regions that affect plasma non-HDL and TG concentrations and obesity in mice with backgrounds that are a combination of B6 and 129. Knowledge of the primary genetic determinants of plasma lipid concentrations and obesity will enhance our understanding of lipoprotein metabolism and likely provide novel molecular targets for metabolic obesity.
This work was funded by AstraZeneca, Sweden, and the National Institutes of Health (Grant CA-34196). The authors thank Eric F. Taylor for excellent technical assistance and Ray A. Lambert and Jennifer L. Smith for helping to prepare the manuscript. N.I. is supported by the Japan Heart Foundation/Bayer Yakuhin Research Grant Abroad and by a Japan Heart Foundation/Pfizer Grant for Research on Hypertension, Hyperlipidemia, and Vascular Metabolism.
Submitted on
March 9, 2004
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